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Biophysics

Three-dimensional crystalline structures from two-dimensional hyperbolic tilings

A variety of projects are available that will contribute to the enumeration and characterisation of 3-periodic network structures via the tiling of periodic minimal surfaces and thereby enhance our understanding of self-assembled structures in nature.

Dr Vanessa Robins, Professor Stephen Hyde

Origomu

The energy lansdscape of folded spheres, assuming elastic membranes and sticky inner surfaces, will be explored. 

Professor Stephen Hyde

Protein structure: new topological methods

The notion of protein secondary and tertiary structure is a loose one, that deserves a deeper look. Some proteins are considered to be highly structured in their usual folded state, others lack well defined structures. We are interested in the basic question "what is structure in a folded protein chain"?

Professor Stephen Hyde

Shape signatures for leaves: an application of topological data analysis

Develop new methods for quantifying the shape of leaves and explore how these are correlated with their physical and biological properties.

Dr Vanessa Robins

Clean Energy

Imaging fluid-fluid interfacial curvatures in porous media: relating physics and geometry

This computational and theoretical project will extract geometric information from sequences of newly obtained 3D x-ray microscope images to better understand how two immiscible fluids interact inside complex porous materials.

A/Prof Adrian Sheppard, Dr Anna Herring

Engineering in Physics

3D image segmentation using machine learning techniques

We aim to use  machine learning techniques to identify minerals and components of three dimensional images obtained from X-ray micro Computed Tomography (XCT).

Dr Mohammad Saadatfar, Dr Shane Latham

Environmental Physics

Inertial effects during immiscible multiphase fluid displacements in porous media

When fluids flow through porous rocks, the relatively slow bulk fluid front advances via a series of very small, very rapid jumps. This project investigates how the distribution and occurance of these jumps are influenced by experimental conditions such as flow rate and intermittentcy.

Dr Anna Herring, A/Prof Adrian Sheppard

4D tomography

The ANU has constructed an X-ray micro-computed tomography facility with a unique helical scanning configuration that enables tomographic images of extremely high quality to be produced.  This experimental project will work with theoreticians to image the evolution of time-changing samples with unprecented time resolution.

A/Prof Adrian Sheppard, Dr Glenn Myers, Dr Andrew Kingston

Growing plants in space: manipulating medium wettability to create optimal saturation conditions

When two or more fluids flow simultaneously within a porous medium, the distribution of the fluids depends on the wettability of the solid grain surfaces. This project will investigate how we can use the wettability property of solid surfaces to create ideal saturation conditions for plants grown under microgravity conditions.

Dr Anna Herring, A/Prof Adrian Sheppard

Nanobubbles

Nanobubbles are simply nanosized bubbles. What makes them interesting? Theory tells us they should dissolve in less than a second but they are stable for days. Additionally, they have lots of interesting properties being implicated in medical treatments and cleaning technologies.

Professor Vincent Craig

Materials Science and Engineering

Granular materials: understanding their geometry and physics

What is a granular material from geometry and physics perspective? We'll try to understand the fundementals of granular materials in this project.

Dr Mohammad Saadatfar, Dr Nicolas Francois, Dr Vanessa Robins, Prof Timothy Senden

Knots, links and tangled nets

Exploration of simpler entangled structures in 3-space is surpisingly undeveloped. Here we plan to catalogue simpler knots, links and tangled nets via two-dimensional geometry. 

Professor Stephen Hyde

Soft Condensed Matter: Molecules made by Threading

Of great recent interest is the subject of rotaxanes.  Rotaxanes are molecules  where one or more ring
components is threaded onto an axle that is capped on both ends with stoppers to prevent the rings from
falling o ff. These systems exhibit complex and fascinating physics.

Professor David Williams

Intelligent 3D X-ray imaging, for improved analysis of complex 3D images.

This project will develop new methods for "intelligent" processing of 3D X-ray data (i.e. methods which use a priori information). These new methods will double as a non-traditional approach to automated image analysis; the project will compare this new approach with more traditional methods.

Dr Glenn Myers, Dr Andrew Kingston, A/Prof Adrian Sheppard

3D phantoms for X-ray micro-tomography

"Phantoms" are objects used for performance testing and/or calibration of 3D X-ray computed tomography (CT) systems. This project involves designing, 3D printing, and subsequently imaging phantoms at the micro-CT facility of the Applied Maths department.

Dr Andrew Kingston, Dr Glenn Myers, A/Prof Adrian Sheppard, Prof Timothy Senden

Compression of 3D X-ray imaging data

The CT lab hosts several 3D X-ray imaging systems, each generating ~240GB/day of data. The student will: (i) explore various data compression schemes; (ii) theoretically and empirically analyse interactions between data compression, X-ray image processing, and 3D analysis; (iii) develop new 3D imaging methods, based on successful data compression schemes

Dr Glenn Myers, Dr Andrew Kingston, A/Prof Adrian Sheppard

Multi-spectral x-ray micro-tomography

The ANU X-ray micro-tomography facility images over a broad spectrum (or range) of X-ray energies. The behaviour of specimens of interest at different X-ray energies can tell us a lot about its composition. This project will explore 1) techniques to image specimens at various X-ray spectral-bands, and 2) methods to analyse the results.

Dr Andrew Kingston, Dr Glenn Myers, A/Prof Adrian Sheppard

High-density artifact correction in x-ray micro-tomography

High-density objects in specimens of interest (e.g., metal-pins in biological specimens), can cause significant quality degradation of 3D images produced at our micro-tomography facility. This project explores/compares techniques in hardware to avoid the problem and techniques in software to correct for the problems caused by these objects.

Dr Andrew Kingston, Dr Glenn Myers, A/Prof Adrian Sheppard

Nanoscience and Nanotechnology

Nanobubbles

Nanobubbles are simply nanosized bubbles. What makes them interesting? Theory tells us they should dissolve in less than a second but they are stable for days. Additionally, they have lots of interesting properties being implicated in medical treatments and cleaning technologies.

Professor Vincent Craig

Physics of Fluids

Imaging fluid-fluid interfacial curvatures in porous media: relating physics and geometry

This computational and theoretical project will extract geometric information from sequences of newly obtained 3D x-ray microscope images to better understand how two immiscible fluids interact inside complex porous materials.

A/Prof Adrian Sheppard, Dr Anna Herring

Inertial effects during immiscible multiphase fluid displacements in porous media

When fluids flow through porous rocks, the relatively slow bulk fluid front advances via a series of very small, very rapid jumps. This project investigates how the distribution and occurance of these jumps are influenced by experimental conditions such as flow rate and intermittentcy.

Dr Anna Herring, A/Prof Adrian Sheppard

Growing plants in space: manipulating medium wettability to create optimal saturation conditions

When two or more fluids flow simultaneously within a porous medium, the distribution of the fluids depends on the wettability of the solid grain surfaces. This project will investigate how we can use the wettability property of solid surfaces to create ideal saturation conditions for plants grown under microgravity conditions.

Dr Anna Herring, A/Prof Adrian Sheppard

Theoretical Physics

Topological Crystallography: Graphs and surfaces with symmetry

What are the underlying geometric and topological properties of periodic structures that guarantee large and stable porosity in nano-porous crystalline materials required for gas storage and efficient catalysis?

Dr Vanessa Robins, Professor Stephen Hyde, Dr Olaf Delgado Friedrich

Soft Condensed Matter: Molecules made by Threading

Of great recent interest is the subject of rotaxanes.  Rotaxanes are molecules  where one or more ring
components is threaded onto an axle that is capped on both ends with stoppers to prevent the rings from
falling o ff. These systems exhibit complex and fascinating physics.

Professor David Williams

Intelligent 3D X-ray imaging, for improved analysis of complex 3D images.

This project will develop new methods for "intelligent" processing of 3D X-ray data (i.e. methods which use a priori information). These new methods will double as a non-traditional approach to automated image analysis; the project will compare this new approach with more traditional methods.

Dr Glenn Myers, Dr Andrew Kingston, A/Prof Adrian Sheppard

Compression of 3D X-ray imaging data

The CT lab hosts several 3D X-ray imaging systems, each generating ~240GB/day of data. The student will: (i) explore various data compression schemes; (ii) theoretically and empirically analyse interactions between data compression, X-ray image processing, and 3D analysis; (iii) develop new 3D imaging methods, based on successful data compression schemes

Dr Glenn Myers, Dr Andrew Kingston, A/Prof Adrian Sheppard

Multi-spectral x-ray micro-tomography

The ANU X-ray micro-tomography facility images over a broad spectrum (or range) of X-ray energies. The behaviour of specimens of interest at different X-ray energies can tell us a lot about its composition. This project will explore 1) techniques to image specimens at various X-ray spectral-bands, and 2) methods to analyse the results.

Dr Andrew Kingston, Dr Glenn Myers, A/Prof Adrian Sheppard

High-density artifact correction in x-ray micro-tomography

High-density objects in specimens of interest (e.g., metal-pins in biological specimens), can cause significant quality degradation of 3D images produced at our micro-tomography facility. This project explores/compares techniques in hardware to avoid the problem and techniques in software to correct for the problems caused by these objects.

Dr Andrew Kingston, Dr Glenn Myers, A/Prof Adrian Sheppard

Topological and Structural Science

Granular materials: understanding their geometry and physics

What is a granular material from geometry and physics perspective? We'll try to understand the fundementals of granular materials in this project.

Dr Mohammad Saadatfar, Dr Nicolas Francois, Dr Vanessa Robins, Prof Timothy Senden

Three-dimensional crystalline structures from two-dimensional hyperbolic tilings

A variety of projects are available that will contribute to the enumeration and characterisation of 3-periodic network structures via the tiling of periodic minimal surfaces and thereby enhance our understanding of self-assembled structures in nature.

Dr Vanessa Robins, Professor Stephen Hyde

Topological Crystallography: Graphs and surfaces with symmetry

What are the underlying geometric and topological properties of periodic structures that guarantee large and stable porosity in nano-porous crystalline materials required for gas storage and efficient catalysis?

Dr Vanessa Robins, Professor Stephen Hyde, Dr Olaf Delgado Friedrich

Knots, links and tangled nets

Exploration of simpler entangled structures in 3-space is surpisingly undeveloped. Here we plan to catalogue simpler knots, links and tangled nets via two-dimensional geometry. 

Professor Stephen Hyde

3D image segmentation using machine learning techniques

We aim to use  machine learning techniques to identify minerals and components of three dimensional images obtained from X-ray micro Computed Tomography (XCT).

Dr Mohammad Saadatfar, Dr Shane Latham

3D print pedagogical models of periodic minimal surfaces

Explore the geometry and symmetries of some periodic minimal surfaces and learn about their relevance in chemical and biological self assembly.  

Dr Vanessa Robins

Origomu

The energy lansdscape of folded spheres, assuming elastic membranes and sticky inner surfaces, will be explored. 

Professor Stephen Hyde

4D tomography

The ANU has constructed an X-ray micro-computed tomography facility with a unique helical scanning configuration that enables tomographic images of extremely high quality to be produced.  This experimental project will work with theoreticians to image the evolution of time-changing samples with unprecented time resolution.

A/Prof Adrian Sheppard, Dr Glenn Myers, Dr Andrew Kingston

3D phantoms for X-ray micro-tomography

"Phantoms" are objects used for performance testing and/or calibration of 3D X-ray computed tomography (CT) systems. This project involves designing, 3D printing, and subsequently imaging phantoms at the micro-CT facility of the Applied Maths department.

Dr Andrew Kingston, Dr Glenn Myers, A/Prof Adrian Sheppard, Prof Timothy Senden

Protein structure: new topological methods

The notion of protein secondary and tertiary structure is a loose one, that deserves a deeper look. Some proteins are considered to be highly structured in their usual folded state, others lack well defined structures. We are interested in the basic question "what is structure in a folded protein chain"?

Professor Stephen Hyde

Shape signatures for leaves: an application of topological data analysis

Develop new methods for quantifying the shape of leaves and explore how these are correlated with their physical and biological properties.

Dr Vanessa Robins

Updated:  15 June 2016/ Responsible Officer:  Head of Department/ Page Contact:  Physics Webmaster